ProViz

ProViz is a protein-protein interaction graphs visualisation tool. It uses the Tulip library to display graphs. 

Features:

Load and save graphs in Tulip and PSI-mi formats 

Efficient and fast navigation through the graphs 

Uses Ontologies described in XML format 

Clustering and exploration tools 

Multiple views of the same graph, each view may be filtered 

Possibility to annotate each node and each edge with a comment

Public

Biologist who wishes to explore interaction graphs between biomolecules. These graphs can be produced by database search, conversion of PSI files, computation (predictive method). ProViz provides facilities to navigate through large graphs and biologically relevant exploration fonctions.

ProViz is developped for the IntAct project by the LaBRI, Bordeaux, France. Contact: David Sherman

Documentation

User's manual (online) 

Addendum (online)

Tutorial (online)

Download 

As of ProViz 1 and 2, Tulip v1.2.5 is required.

Sources: proviz-2.0.tar.bz2

Sources: proviz-1.2.tar.bz2

 

 

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